System


Only the most advanced, state-of-the-art technologies have been carefully selected by Macrogen to facilitate large studies, whilst taking care to provide smaller-scale investigations. Partnered with NGS-tech leaders from Illumina, Pacific Biosciences, Thermo Fisher Scientific, 10X Genomics, Bionano Genomics and many others, Macrogen primarily focuses on providing total genomic solutions tailored to client’s specific needs.

System

Illumina

Platform Novaseq6000

Novaseq6000

Hiseq X ten

Hiseq X ten

Hiseq4000

Hiseq4000

Hiseq2500

Hiseq2500-

Nextseq500

Nextseq500

Miseq

Miseq

Recommended Application
Whole Genome Resequencing
(human, plant & animal)
V V V V
Whole-Genome De novo Sequencing V V V V V
Exome Sequencing V V V
Targeted Gene Sequencing
(amplicon, gene panel, customized target)
V V V V
totalRNA Sequencing V V V
mRNA Sequencing V V V
smallRNA Sequencing V
Metagenome Shotgun Sequencing V V V
16S Metagenomic Sequencing V V V
ChIP Sequencing V V V
MBD Sequencing V V V
Methylation (WGBS) Sequencing V V V V
Specifications Rapid Mode HT
(high-throughput) Mode
Reads Length 150bpPE
100bpPE
150bpPE 150bpPE
100bpPE
250bpPE
150bpPE
100bpPE
100bpSR
50bpSR
125bpPE
100bpPE
100bpSR
50bpSR
150bpPE 300bpPE
250bpPE
150bpPE
Run Scale 3,000M reads* 700M reads* 500M~600M reads* 250M reads* 400M~500M reads* 400M reads* 20-40M reads*
Quality Score >75% bases higher than 30 (illumina)

Avg. >85% bases higher than Q30 (Macrogen)

>75% bases higher than 30 (illumina)

Avg. >85% bases higher than Q30 (Macrogen)

>75% bases higher than 30 (illumina)

Avg. >85% bases higher than Q30 (Macrogen)

>80% bases higher than 30 (illumina)

Avg. >90% bases higher than Q30 (Macrogen)

>80% bases higher than 30 (illumina)

Avg. >90% bases higher than Q30 (Macrogen)

>70% bases higher than 30 (illumina)

Avg. >80% bases higher than Q30 (Macrogen)

>70% bases higher than 30 (illumina)

Avg. >80% bases higher than Q30 (Macrogen)

TAT 4-6 Weeks 2-4 Weeks 4-6 Weeks 2-4 Weeks 4-6 Weeks 4-6 Weeks 4-6 Weeks
*   Based on a lane
** Per run SMRT cell
V  Recommended
V  Highly recommended
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